Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | PAM7971_00604 | Not Available | Positive | 624889 - 625212 | 11368.1 |
| bifunctional preprotein translocase subunit secd/secf | PAM7971_00605 | Not Available | Positive | 625318 - 627945 | 94078.9 |
| hypothetical protein | PAM7971_00606 | Not Available | Positive | 628003 - 628356 | 12383.0 |
| cytochrome c biogenesis atp-binding export protein ccma | PAM7971_00607 | Not Available | Positive | 628388 - 629008 | 21055.4 |
| heme exporter protein b | PAM7971_00608 | Not Available | Positive | 629005 - 629661 | 22770.1 |
| heme exporter protein c | PAM7971_00609 | Not Available | Positive | 629726 - 630460 | 27373.8 |
| heme exporter protein d (ccmd) | PAM7971_00610 | Not Available | Positive | 630457 - 630615 | 5709.21 |
| thiol:disulfide interchange protein cycy precursor | PAM7971_00611 | Not Available | Positive | 630608 - 631147 | 19292.0 |
| methionine gamma-lyase | PAM7971_00612 | Not Available | Negative | 631290 - 632564 | 45318.0 |
| helix-turn-helix domain protein | PAM7971_00613 | Not Available | Positive | 632835 - 633206 | 12857.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
