Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_00574 | Not Available | Negative | 588402 - 588623 | 8419.01 |
| molybdopterin molybdenumtransferase | PAM7971_00575 | Not Available | Negative | 588771 - 589940 | 40456.1 |
| cyclic pyranopterin monophosphate synthase accessory protein | PAM7971_00576 | Not Available | Negative | 589937 - 590425 | 17114.1 |
| indole-3-glycerol phosphate synthase | PAM7971_00577 | Not Available | Negative | 590456 - 591256 | 28182.8 |
| cytochrome p450 107b1 | PAM7971_00578 | Not Available | Negative | 591305 - 592486 | 44329.0 |
| c4-dicarboxylate transport sensor protein dctb | PAM7971_00579 | Not Available | Positive | 592497 - 594404 | 67619.4 |
| c4-dicarboxylate transport transcriptional regulatory protein dctd | PAM7971_00580 | Not Available | Positive | 594404 - 595645 | 44756.2 |
| c4-dicarboxylate-binding periplasmic protein precursor | PAM7971_00581 | Not Available | Positive | 595925 - 596926 | 36643.5 |
| 2,3-diketo-l-gulonate trap transporter small permease protein yiam | PAM7971_00582 | Not Available | Positive | 597058 - 597744 | 25568.2 |
| sialic acid trap transporter permease protein siat | PAM7971_00583 | Not Available | Positive | 597750 - 599138 | 48902.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
