Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonates import atp-binding protein ssub | PAM7971_00023 | Not Available | Positive | 19501 - 20226 | 25964.6 |
| putative aliphatic sulfonates transport permease protein ssuc | PAM7971_00024 | Not Available | Positive | 20223 - 20966 | 26336.6 |
| putative l,d-transpeptidase ynhg precursor | PAM7971_00025 | Not Available | Positive | 21157 - 21819 | 23965.5 |
| hypothetical protein | PAM7971_00026 | Not Available | Negative | 21858 - 22142 | 10078.0 |
| hypothetical protein | PAM7971_00027 | Not Available | Positive | 22271 - 23038 | 27898.3 |
| hypothetical protein | PAM7971_00028 | Not Available | Negative | 23142 - 23423 | 10442.3 |
| hypothetical protein | PAM7971_00029 | Not Available | Positive | 23455 - 23802 | 12448.3 |
| 2-amino-3-ketobutyrate coenzyme a ligase | PAM7971_00030 | Not Available | Positive | 23942 - 24400 | 16597.0 |
| l-threonine 3-dehydrogenase | PAM7971_00031 | Not Available | Positive | 24545 - 24829 | 10132.3 |
| enamine/imine deaminase | PAM7971_00032 | Not Available | Positive | 25054 - 25446 | 14391.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
