Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur oxidation protein soxz | PAM7971_00534 | Not Available | Positive | 550127 - 550456 | 11997.2 |
| soxax cytochrome complex subunit a precursor | PAM7971_00535 | Not Available | Positive | 550486 - 551346 | 31020.5 |
| trifunctional nucleotide phosphoesterase protein yfkn precursor | PAM7971_00536 | Not Available | Positive | 551488 - 553185 | 62092.5 |
| tmao/dmso reductase | PAM7971_00537 | Not Available | Positive | 553279 - 554574 | 47229.5 |
| cytochrome c2 | PAM7971_00538 | Not Available | Positive | 554558 - 555628 | 38163.8 |
| hypothetical protein | PAM7971_00539 | Not Available | Positive | 555722 - 556156 | 15837.9 |
| camp receptor protein | PAM7971_00540 | Not Available | Positive | 556207 - 556863 | 23924.8 |
| hypothetical protein | PAM7971_00541 | Not Available | Negative | 556870 - 557073 | 7226.11 |
| methylmalonate-semialdehyde dehydrogenase | PAM7971_00542 | Not Available | Negative | 557246 - 558745 | 53394.0 |
| hth-type transcriptional regulator gltc | PAM7971_00543 | Not Available | Positive | 558882 - 559772 | 32405.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
