Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | PAM7971_00524 | Not Available | Negative | 543170 - 543745 | 20855.8 |
| putative hydroxypyruvate reductase | PAM7971_00525 | Not Available | Positive | 543806 - 545080 | 44000.8 |
| putative inner membrane protein | PAM7971_00526 | Not Available | Negative | 545081 - 546145 | 36191.5 |
| biofilm growth-associated repressor | PAM7971_00527 | Not Available | Negative | 546178 - 546543 | 13467.2 |
| hypothetical protein | PAM7971_00528 | Not Available | Negative | 546562 - 547062 | 17429.1 |
| hypothetical protein | PAM7971_00529 | Not Available | Negative | 547085 - 547525 | 16079.3 |
| cytochrome c biogenesis protein transmembrane region | PAM7971_00530 | Not Available | Positive | 547660 - 548415 | 27009.0 |
| thiol:disulfide interchange protein dsbd | PAM7971_00531 | Not Available | Positive | 548419 - 549024 | 22832.4 |
| cytochrome c | PAM7971_00532 | Not Available | Positive | 549167 - 549640 | 16436.6 |
| sulfur oxidation protein soxy | PAM7971_00533 | Not Available | Positive | 549680 - 550096 | 13336.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
