Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PAM7971_00494 | Not Available | Positive | 506362 - 507450 | 39287.7 |
| hypothetical protein | PAM7971_00495 | Not Available | Positive | 507465 - 507875 | 14988.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase 2 | PAM7971_00496 | Not Available | Negative | 508119 - 509093 | 34212.0 |
| hypothetical protein | PAM7971_00497 | Not Available | Positive | 509258 - 510391 | 39857.8 |
| putative l-lactate dehydrogenase operon regulatory protein | PAM7971_00498 | Not Available | Positive | 510391 - 511125 | 27123.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PAM7971_00499 | Not Available | Negative | 511142 - 512023 | 31562.4 |
| alcohol dehydrogenase 2 | PAM7971_00500 | Not Available | Negative | 512057 - 513172 | 38816.5 |
| hypothetical protein | PAM7971_00501 | Not Available | Negative | 513174 - 514394 | 43786.1 |
| periplasmic dipeptide transport protein precursor | PAM7971_00502 | Not Available | Positive | 514740 - 516251 | 54474.9 |
| glutathione transport system permease protein gsic | PAM7971_00503 | Not Available | Positive | 516339 - 517253 | 32966.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
