Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | PAM7971_00474 | Not Available | Positive | 485323 - 486198 | 32823.0 |
| acyl-coa dehydrogenase | PAM7971_00475 | Not Available | Positive | 486345 - 487919 | 55646.4 |
| hth-type transcriptional activator btr | PAM7971_00476 | Not Available | Negative | 487916 - 488779 | 31615.0 |
| p-hydroxybenzoate hydroxylase | PAM7971_00477 | Not Available | Positive | 488874 - 490043 | 43510.0 |
| hth-type transcriptional regulator gbpr | PAM7971_00478 | Not Available | Negative | 490064 - 490978 | 33528.7 |
| carboxymuconolactone decarboxylase family protein | PAM7971_00479 | Not Available | Positive | 491145 - 491531 | 14017.4 |
| protocatechuate 3,4-dioxygenase beta chain | PAM7971_00480 | Not Available | Positive | 491524 - 492252 | 27648.9 |
| protocatechuate 3,4-dioxygenase alpha chain | PAM7971_00481 | Not Available | Positive | 492255 - 492854 | 21916.8 |
| 3-carboxy-cis,cis-muconate cycloisomerase | PAM7971_00482 | Not Available | Positive | 492927 - 493997 | 37964.6 |
| pca regulon regulatory protein | PAM7971_00483 | Not Available | Negative | 494008 - 494766 | 27045.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
