Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase | PAM7971_00012 | Not Available | Positive | 11397 - 12083 | 25202.9 |
| aspartoacylase | PAM7971_00013 | Not Available | Negative | 12371 - 13414 | 37278.1 |
| ribosomal protein s6 modification protein | PAM7971_00014 | Not Available | Negative | 13414 - 14319 | 32468.6 |
| hypothetical protein | PAM7971_00015 | Not Available | Negative | 14356 - 14769 | 15740.4 |
| hypothetical protein | PAM7971_00016 | Not Available | Positive | 15074 - 15361 | 10654.8 |
| hydroxyethylthiazole kinase | PAM7971_00018 | Not Available | Positive | 15656 - 16441 | 26220.4 |
| thiamine-phosphate synthase | PAM7971_00019 | Not Available | Positive | 16432 - 17070 | 21734.1 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | PAM7971_00020 | Not Available | Positive | 17067 - 17870 | 27084.7 |
| putative thiamine biosynthesis protein | PAM7971_00021 | Not Available | Positive | 17883 - 18821 | 34085.7 |
| thiaminase-2 | PAM7971_00022 | Not Available | Positive | 18818 - 19504 | 25047.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
