Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_00444 | Not Available | Positive | 456407 - 456571 | 5735.22 |
| cytochrome c oxidase assembly protein ctag | PAM7971_00445 | Not Available | Positive | 456571 - 457152 | 21281.1 |
| cytochrome c oxidase subunit 3 | PAM7971_00446 | Not Available | Positive | 457195 - 457998 | 30641.7 |
| surf1 family protein | PAM7971_00447 | Not Available | Positive | 458097 - 458765 | 24575.2 |
| threonine synthase | PAM7971_00448 | Not Available | Positive | 458792 - 460174 | 49773.4 |
| protease 3 precursor | PAM7971_00449 | Not Available | Positive | 460171 - 461427 | 45837.4 |
| putative ribosomal n-acetyltransferase ydaf | PAM7971_00450 | Not Available | Positive | 461430 - 462020 | 22472.9 |
| putative fad-linked oxidoreductase | PAM7971_00451 | Not Available | Positive | 462042 - 463457 | 50283.4 |
| adenine phosphoribosyltransferase | PAM7971_00452 | Not Available | Negative | 463549 - 464085 | 19278.5 |
| s-methyl-5'-thioadenosine phosphorylase | PAM7971_00453 | Not Available | Negative | 464090 - 464962 | 31153.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
