Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoacetaldehyde reductase | PAM7971_00434 | Not Available | Negative | 443806 - 444570 | 27498.2 |
| putative decaprenylphosphoryl-beta-d-ribose oxidase | PAM7971_00435 | Not Available | Negative | 444567 - 445913 | 48047.8 |
| hypothetical protein | PAM7971_00436 | Not Available | Negative | 445894 - 446940 | 37484.0 |
| putative succinyl-coa:3-ketoacid coenzyme a transferase subunit b | PAM7971_00437 | Not Available | Negative | 447123 - 447752 | 22052.8 |
| putative succinyl-coa:3-ketoacid coenzyme a transferase subunit a | PAM7971_00438 | Not Available | Negative | 447752 - 448456 | 25285.5 |
| dna topoisomerase 1 | PAM7971_00439 | Not Available | Negative | 448615 - 451248 | 96704.5 |
| hypothetical protein | PAM7971_00440 | Not Available | Negative | 451472 - 452614 | 40437.9 |
| protease tldd | PAM7971_00441 | Not Available | Negative | 452863 - 454284 | 49817.2 |
| cytochrome c oxidase subunit 2 precursor | PAM7971_00442 | Not Available | Positive | 454462 - 455328 | 31700.1 |
| protoheme ix farnesyltransferase | PAM7971_00443 | Not Available | Positive | 455456 - 456406 | 34196.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
