Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PAM7971_00424 | Not Available | Negative | 433094 - 433750 | 23549.7 |
| bacterial type ii secretion system protein f domain protein | PAM7971_00425 | Not Available | Negative | 433806 - 434795 | 36237.6 |
| bacterial type ii secretion system protein f domain protein | PAM7971_00426 | Not Available | Negative | 434814 - 435782 | 35382.3 |
| putative conjugal transfer protein/mt3759 | PAM7971_00427 | Not Available | Negative | 435798 - 437261 | 54078.9 |
| chromosome partitioning protein para | PAM7971_00428 | Not Available | Negative | 437294 - 438541 | 46038.2 |
| outer membrane porin f precursor | PAM7971_00429 | Not Available | Negative | 438737 - 439396 | 23953.3 |
| type ii secretion system protein d precursor | PAM7971_00430 | Not Available | Negative | 439401 - 440810 | 49847.5 |
| hypothetical protein | PAM7971_00431 | Not Available | Negative | 441080 - 441928 | 30504.8 |
| hypothetical protein | PAM7971_00432 | Not Available | Negative | 442198 - 442383 | 6445.69 |
| soluble lytic murein transglycosylase precursor | PAM7971_00433 | Not Available | Positive | 442861 - 443733 | 29982.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
