Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system protein ybgf | PAM7971_00414 | Not Available | Positive | 421890 - 422750 | 30082.4 |
| trna(ile)-lysidine synthase | PAM7971_00415 | Not Available | Positive | 422823 - 424106 | 47151.4 |
| atp-dependent zinc metalloprotease ftsh | PAM7971_00416 | Not Available | Positive | 424186 - 426108 | 69332.6 |
| isochorismate-pyruvate lyase | PAM7971_00417 | Not Available | Positive | 426259 - 426570 | 11598.9 |
| bifunctional protein fold protein | PAM7971_00418 | Not Available | Positive | 426567 - 427469 | 31397.1 |
| 2-hydroxy-3-oxopropionate reductase | PAM7971_00419 | Not Available | Negative | 427617 - 428420 | 28645.6 |
| hypothetical protein | PAM7971_00420 | Not Available | Negative | 428506 - 429819 | 49142.4 |
| hypothetical protein | PAM7971_00421 | Not Available | Positive | 429870 - 431603 | 63378.8 |
| type iv leader peptidase family protein | PAM7971_00422 | Not Available | Negative | 431621 - 432115 | 18077.6 |
| photosystem i assembly protein ycf3 | PAM7971_00423 | Not Available | Negative | 432115 - 432972 | 31273.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
