Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | PAM7971_00404 | Not Available | Positive | 413921 - 414490 | 19829.1 |
| holliday junction atp-dependent dna helicase ruva | PAM7971_00405 | Not Available | Positive | 414487 - 415173 | 23928.0 |
| holliday junction atp-dependent dna helicase ruvb | PAM7971_00406 | Not Available | Positive | 415177 - 416220 | 38677.6 |
| hypothetical protein | PAM7971_00407 | Not Available | Positive | 416277 - 416927 | 23415.9 |
| acyl-coa thioester hydrolase ybgc | PAM7971_00408 | Not Available | Positive | 416990 - 417379 | 14727.8 |
| biopolymer transport protein exbb | PAM7971_00409 | Not Available | Positive | 417529 - 418224 | 24775.9 |
| biopolymer transport protein exbd | PAM7971_00410 | Not Available | Positive | 418228 - 418713 | 17079.7 |
| hypothetical protein | PAM7971_00411 | Not Available | Positive | 418724 - 419896 | 40126.2 |
| translocation protein tolb | PAM7971_00412 | Not Available | Positive | 419893 - 421245 | 48276.9 |
| outer membrane lipoprotein omp16 precursor | PAM7971_00413 | Not Available | Positive | 421330 - 421878 | 19090.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
