Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pacificibacter marinus
Accession NumberFWFW00000000.1
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | + | 2862 - 5682 | Not Available |
| hth-type transcriptional regulator mcbr | PAM7971_00004 | Not Available | - | 2865 - 3560 | 26374.2 |
| gamma-glutamylputrescine synthetase puua | PAM7971_00005 | Not Available | + | 3679 - 5028 | 49246.7 |
| gamma-glutamylputrescine oxidoreductase | PAM7971_00006 | Not Available | + | 5028 - 6338 | 47137.3 |
| 5s ribosomal rna | Not Available | Not Available | + | 5812 - 5921 | Not Available |
| putrescine-binding periplasmic protein precursor | PAM7971_00007 | Not Available | + | 6386 - 7468 | 38791.3 |
| spermidine/putrescine import atp-binding protein pota | PAM7971_00008 | Not Available | + | 7535 - 8674 | 42007.4 |
| putrescine transport system permease protein poth | PAM7971_00009 | Not Available | + | 8671 - 9624 | 35242.1 |
| inner membrane abc transporter permease protein ydcv | PAM7971_00010 | Not Available | + | 9621 - 10424 | 28798.5 |
| agmatinase | PAM7971_00011 | Not Available | + | 10417 - 11388 | 34776.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.