Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport atp-binding protein oppd | PAM7971_00353 | Not Available | Positive | 364404 - 365240 | 30487.3 |
| oligopeptide transport atp-binding protein oppf | PAM7971_00354 | Not Available | Positive | 365237 - 365992 | 27436.2 |
| hypothetical protein | PAM7971_00355 | Not Available | Positive | 365989 - 366483 | 17885.6 |
| riboflavin transporter | PAM7971_00356 | Not Available | Negative | 366568 - 367455 | 31822.7 |
| bacterial regulatory proteins, tetr family | PAM7971_00358 | Not Available | Negative | 367753 - 368424 | 24674.2 |
| multidrug resistance protein mexa precursor | PAM7971_00359 | Not Available | Positive | 368622 - 369776 | 40759.5 |
| putative efflux pump membrane transporter ttgb | PAM7971_00360 | Not Available | Positive | 369798 - 372905 | 110685.0 |
| putative l,d-transpeptidase ybis precursor | PAM7971_00361 | Not Available | Negative | 372997 - 373692 | 25194.2 |
| hypothetical protein | PAM7971_00362 | Not Available | Negative | 373744 - 374061 | 11478.1 |
| hypothetical protein | PAM7971_00363 | Not Available | Positive | 374126 - 374266 | 5245.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
