Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_03852 | Not Available | Positive | 3899921 - 3900157 | 8740.55 |
| hypothetical protein | PAM7971_03853 | Not Available | Positive | 3900157 - 3900375 | 8054.16 |
| hypothetical protein | PAM7971_03854 | Not Available | Positive | 3900362 - 3900835 | 16664.6 |
| hypothetical protein | PAM7971_03855 | Not Available | Positive | 3900832 - 3901104 | 9932.0 |
| hypothetical protein | PAM7971_03856 | Not Available | Positive | 3901094 - 3901465 | 13270.0 |
| hypothetical protein | PAM7971_03857 | Not Available | Negative | 3903270 - 3903452 | 6623.35 |
| ureidoglycolate lyase | PAM7971_03858 | Not Available | Negative | 3903584 - 3904423 | 29964.5 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | PAM7971_03859 | Not Available | Negative | 3904451 - 3905197 | 25820.9 |
| integrase core domain protein | PAM7971_03860 | Not Available | Negative | 3905284 - 3906264 | 38300.6 |
| transposase | PAM7971_03861 | Not Available | Negative | 3906261 - 3906626 | 13855.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
