Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_00343 | Not Available | Negative | 347335 - 347844 | 18025.3 |
| virulence factors putative positive transcription regulator bvga | PAM7971_00344 | Not Available | Negative | 348148 - 348768 | 22556.4 |
| oxidoreductase molybdopterin binding domain protein | PAM7971_00345 | Not Available | Positive | 348985 - 349500 | 18865.3 |
| aerobic respiration control sensor protein arcb | PAM7971_00346 | Not Available | Positive | 349523 - 352099 | 94704.9 |
| hypothetical protein | PAM7971_00347 | Not Available | Negative | 352502 - 358420 | 203457.0 |
| xaa-pro dipeptidase | PAM7971_00348 | Not Available | Negative | 358709 - 359815 | 39844.2 |
| putative d,d-dipeptide-binding periplasmic protein ddpa precursor | PAM7971_00349 | Not Available | Negative | 359897 - 361486 | 57991.8 |
| hth-type transcriptional regulator puur | PAM7971_00350 | Not Available | Negative | 361539 - 362150 | 22015.0 |
| dipeptide transport system permease protein dppb | PAM7971_00351 | Not Available | Positive | 362449 - 363492 | 37731.7 |
| putative d,d-dipeptide transport system permease protein ddpc | PAM7971_00352 | Not Available | Positive | 363502 - 364407 | 32223.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
