Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine transport atp-binding protein opuaa | PAM7971_03693 | Not Available | Negative | 3755018 - 3756103 | 39842.0 |
| glycine betaine/l-proline transport system permease protein prow | PAM7971_03694 | Not Available | Negative | 3756096 - 3756983 | 31957.4 |
| glycine betaine transporter periplasmic subunit | PAM7971_03695 | Not Available | Negative | 3757069 - 3758076 | 36131.4 |
| putative multidrug export atp-binding/permease protein | PAM7971_03696 | Not Available | Positive | 3758436 - 3760220 | 63770.2 |
| lysm domain/bon superfamily protein | PAM7971_03697 | Not Available | Positive | 3760310 - 3760738 | 15299.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | PAM7971_03698 | Not Available | Negative | 3760826 - 3761944 | 40035.5 |
| long-chain-fatty-acid--coa ligase | PAM7971_03699 | Not Available | Positive | 3762172 - 3764076 | 69243.0 |
| hypothetical protein | PAM7971_03700 | Not Available | Negative | 3763949 - 3764212 | 9979.28 |
| hypothetical protein | PAM7971_03701 | Not Available | Positive | 3764308 - 3764514 | 7159.17 |
| prophage cp4-57 integrase | PAM7971_03702 | Not Available | Positive | 3765033 - 3766226 | 44630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
