Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator protein copr | PAM7971_00333 | Not Available | Negative | 329069 - 329452 | 14507.7 |
| hypothetical protein | PAM7971_00334 | Not Available | Positive | 329723 - 330697 | 36622.5 |
| hpt domain protein | PAM7971_00335 | Not Available | Positive | 330802 - 331107 | 10882.0 |
| sensor histidine kinase yycg | PAM7971_00336 | Not Available | Negative | 331214 - 332344 | 41143.1 |
| sensor histidine kinase rcsc | PAM7971_00337 | Not Available | Negative | 332552 - 335404 | 106234.0 |
| hemolysin, plasmid | PAM7971_00338 | Not Available | Negative | 335681 - 337198 | 54216.2 |
| hypothetical protein | PAM7971_00339 | Not Available | Negative | 337345 - 337512 | 6037.27 |
| hypothetical protein | PAM7971_00340 | Not Available | Negative | 337848 - 338588 | 27150.2 |
| hypothetical protein | PAM7971_00341 | Not Available | Negative | 338830 - 344586 | 206552.0 |
| npcbm-associated, new3 domain of alpha-galactosidase | PAM7971_00342 | Not Available | Negative | 344674 - 347283 | 88234.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
