Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane abc transporter permease protein yjff | PAM7971_03673 | Not Available | Positive | 3728546 - 3729538 | 34538.0 |
| hth-type transcriptional regulator mce2r | PAM7971_03674 | Not Available | Positive | 3729484 - 3730266 | 28669.3 |
| hypothetical protein | PAM7971_03675 | Not Available | Negative | 3730276 - 3731238 | 35342.2 |
| Trna-met | Not Available | Not Available | Positive | 3731330 - 3731406 | Not Available |
| aldose 1-epimerase | PAM7971_03677 | Not Available | Negative | 3731784 - 3732776 | 34963.0 |
| l-arabinolactonase | PAM7971_03678 | Not Available | Negative | 3732773 - 3733624 | 31318.4 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | PAM7971_03679 | Not Available | Negative | 3733621 - 3734226 | 20378.6 |
| 2-keto-3-deoxy-galactonokinase | PAM7971_03680 | Not Available | Negative | 3734230 - 3735135 | 32017.4 |
| copper-transporting p-type atpase | PAM7971_03681 | Not Available | Positive | 3735415 - 3737856 | 84805.5 |
| hypothetical protein | PAM7971_03682 | Not Available | Positive | 3738093 - 3741242 | 105640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
