Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | PAM7971_03643 | Not Available | Positive | 3693649 - 3694383 | 25599.7 |
| riboflavin transporter | PAM7971_03644 | Not Available | Negative | 3694442 - 3695341 | 32671.2 |
| 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase | PAM7971_03645 | Not Available | Negative | 3695366 - 3696433 | 38024.2 |
| altronate dehydratase | PAM7971_03646 | Not Available | Negative | 3696433 - 3697923 | 52536.6 |
| sialic acid trap transporter permease protein siat | PAM7971_03647 | Not Available | Negative | 3698071 - 3699699 | 58151.2 |
| 2,3-diketo-l-gulonate trap transporter small permease protein yiam | PAM7971_03648 | Not Available | Negative | 3699701 - 3700501 | 30052.1 |
| lactate-binding periplasmic protein precursor | PAM7971_03649 | Not Available | Negative | 3700609 - 3701622 | 36591.1 |
| putative hth-type transcriptional regulator ydfh | PAM7971_03650 | Not Available | Positive | 3701853 - 3702521 | 24936.9 |
| transketolase 2 | PAM7971_03651 | Not Available | Positive | 3702626 - 3703483 | 31137.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | PAM7971_03652 | Not Available | Positive | 3703480 - 3704550 | 38431.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
