Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| altronate dehydratase | PAM7971_03613 | Not Available | Negative | 3660095 - 3660409 | 11051.5 |
| bifunctional protein paaz | PAM7971_03614 | Not Available | Negative | 3660406 - 3660852 | 16623.1 |
| 1,5-anhydro-d-fructose reductase | PAM7971_03615 | Not Available | Negative | 3660845 - 3661921 | 38796.8 |
| l-rhamnose mutarotase | PAM7971_03616 | Not Available | Negative | 3661914 - 3662243 | 12709.1 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PAM7971_03617 | Not Available | Negative | 3662254 - 3663342 | 39617.9 |
| inner membrane abc transporter permease protein ycjp | PAM7971_03618 | Not Available | Negative | 3663346 - 3664212 | 31462.3 |
| trehalose transport system permease protein suga | PAM7971_03619 | Not Available | Negative | 3664216 - 3665112 | 33318.1 |
| putative abc transporter-binding protein precursor | PAM7971_03620 | Not Available | Negative | 3665216 - 3666520 | 46428.9 |
| 4-sulfomuconolactone hydrolase | PAM7971_03621 | Not Available | Positive | 3666728 - 3667558 | 30389.2 |
| phosphoglucomutase | PAM7971_03622 | Not Available | Negative | 3667586 - 3669211 | 57378.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
