Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional activator | PAM7971_03603 | Not Available | Positive | 3648979 - 3649851 | 32456.9 |
| hypothetical protein | PAM7971_03604 | Not Available | Positive | 3649996 - 3650163 | 6292.83 |
| hypothetical protein | PAM7971_03605 | Not Available | Negative | 3650499 - 3651095 | 22775.9 |
| hypothetical protein | PAM7971_03606 | Not Available | Positive | 3651473 - 3651997 | 19661.1 |
| dna repair protein rada | PAM7971_03607 | Not Available | Positive | 3652574 - 3654520 | 69187.1 |
| hypothetical protein | PAM7971_03608 | Not Available | Negative | 3654621 - 3654977 | 13478.5 |
| hypothetical protein | PAM7971_03609 | Not Available | Positive | 3655243 - 3656040 | 29449.5 |
| hypothetical protein | PAM7971_03610 | Not Available | Negative | 3656083 - 3656739 | 24832.2 |
| reverse transcriptase (rna-dependent dna polymerase) | PAM7971_03611 | Not Available | Negative | 3656969 - 3658621 | 63814.2 |
| (2r)-sulfolactate sulfo-lyase subunit beta | PAM7971_03612 | Not Available | Negative | 3658887 - 3660098 | 41877.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
