Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid trap transporter permease protein siat | PAM7971_00323 | Not Available | Positive | 317850 - 318368 | 18869.5 |
| sialic acid trap transporter permease protein siat | PAM7971_00324 | Not Available | Positive | 318365 - 319663 | 44920.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PAM7971_00325 | Not Available | Positive | 319668 - 320603 | 33614.9 |
| dimethyl sulfoxide/trimethylamine n-oxide reductase precursor | PAM7971_00326 | Not Available | Positive | 320607 - 322877 | 81422.2 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_00327 | Not Available | Positive | 322889 - 323668 | 27399.8 |
| d-amino acid dehydrogenase small subunit | PAM7971_00328 | Not Available | Positive | 323676 - 324917 | 44701.5 |
| leucine-responsive regulatory protein | PAM7971_00329 | Not Available | Negative | 324927 - 325463 | 20408.8 |
| putative cysteine desulfurase | PAM7971_00330 | Not Available | Positive | 325489 - 326934 | 51864.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_00331 | Not Available | Negative | 327108 - 327866 | 26530.9 |
| hth-type transcriptional activator btr | PAM7971_00332 | Not Available | Positive | 327966 - 328910 | 33846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
