Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_03573 | Not Available | Negative | 3613298 - 3613873 | 20866.9 |
| transcriptional activator fear | PAM7971_03574 | Not Available | Negative | 3614041 - 3616371 | 84979.1 |
| acetamidase | PAM7971_03575 | Not Available | Positive | 3616711 - 3618162 | 52326.6 |
| hypothetical protein | PAM7971_03576 | Not Available | Negative | 3618261 - 3618467 | 7776.57 |
| type i restriction enzyme ecoki m protein | PAM7971_03577 | Not Available | Positive | 3618648 - 3620951 | 85528.1 |
| type-1 restriction enzyme ecoki specificity protein | PAM7971_03578 | Not Available | Positive | 3620951 - 3622381 | 52849.2 |
| type i restriction enzyme ecor124ii r protein | PAM7971_03579 | Not Available | Positive | 3622378 - 3625635 | 121831.0 |
| hypothetical protein | PAM7971_03580 | Not Available | Positive | 3625795 - 3625917 | 4496.6 |
| hypothetical protein | PAM7971_03581 | Not Available | Positive | 3626284 - 3626475 | 6990.3 |
| phage integrase family protein | PAM7971_03582 | Not Available | Positive | 3626492 - 3627406 | 33901.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
