Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prophage cp4-57 integrase | PAM7971_03553 | Not Available | Positive | 3586395 - 3587633 | 46310.4 |
| acyl-homoserine-lactone synthase | PAM7971_03554 | Not Available | Positive | 3588275 - 3588907 | 23801.5 |
| hypothetical protein | PAM7971_03555 | Not Available | Negative | 3589405 - 3590019 | 21883.6 |
| intracellular exo-alpha-(1->5)-l-arabinofuranosidase | PAM7971_03556 | Not Available | Negative | 3590032 - 3591732 | 62840.3 |
| hypothetical protein | PAM7971_03557 | Not Available | Negative | 3592670 - 3593695 | 38166.0 |
| sensor protein qsec | PAM7971_03558 | Not Available | Negative | 3593668 - 3595041 | 49640.4 |
| transcriptional regulatory protein tctd | PAM7971_03559 | Not Available | Negative | 3595034 - 3595699 | 24774.8 |
| tripartite tricarboxylate transporter family receptor | PAM7971_03560 | Not Available | Positive | 3595806 - 3596792 | 33825.3 |
| tripartite tricarboxylate transporter tctb family protein | PAM7971_03561 | Not Available | Positive | 3596867 - 3597361 | 18541.4 |
| tripartite tricarboxylate transporter tcta family protein | PAM7971_03562 | Not Available | Positive | 3597363 - 3598874 | 52583.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
