Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor yvoa | PAM7971_03543 | Not Available | Positive | 3575077 - 3575790 | 26279.3 |
| alcohol dehydrogenase | PAM7971_03544 | Not Available | Positive | 3575801 - 3577420 | 58290.9 |
| transposase is116/is110/is902 family protein | PAM7971_03545 | Not Available | Positive | 3577870 - 3578466 | 21919.3 |
| sn-glycerol-3-phosphate-binding periplasmic protein ugpb precursor | PAM7971_03546 | Not Available | Positive | 3578787 - 3580091 | 47737.8 |
| sn-glycerol-3-phosphate transport system permease protein ugpa | PAM7971_03547 | Not Available | Positive | 3580155 - 3581036 | 32895.7 |
| l-arabinose transport system permease protein araq | PAM7971_03548 | Not Available | Positive | 3581046 - 3581918 | 32420.8 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PAM7971_03549 | Not Available | Positive | 3581929 - 3582975 | 37931.0 |
| endonuclease/exonuclease/phosphatase family protein | PAM7971_03550 | Not Available | Positive | 3582972 - 3583964 | 35508.9 |
| hypothetical protein | PAM7971_03551 | Not Available | Negative | 3584262 - 3584993 | 26815.3 |
| site-specific tyrosine recombinase xerc | PAM7971_03552 | Not Available | Negative | 3585157 - 3586122 | 36444.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
