Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_03533 | Not Available | Positive | 3564613 - 3564702 | 3336.24 |
| hypothetical protein | PAM7971_03534 | Not Available | Positive | 3565742 - 3565900 | 5320.02 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase | PAM7971_03535 | Not Available | Negative | 3565897 - 3566667 | 26866.4 |
| putative zinc-type alcohol dehydrogenase-like protein yjmd | PAM7971_03536 | Not Available | Negative | 3566664 - 3567698 | 36800.4 |
| mandelate racemase | PAM7971_03537 | Not Available | Negative | 3567711 - 3568808 | 39457.3 |
| ribose transport system permease protein rbsc | PAM7971_03538 | Not Available | Negative | 3568805 - 3569806 | 34750.2 |
| ribose transport system permease protein rbsc | PAM7971_03539 | Not Available | Negative | 3569809 - 3570789 | 33593.4 |
| ribose import atp-binding protein rbsa | PAM7971_03540 | Not Available | Negative | 3570786 - 3572303 | 54607.2 |
| abc transporter periplasmic-binding protein ytfq precursor | PAM7971_03541 | Not Available | Negative | 3572384 - 3573358 | 34641.1 |
| lactaldehyde dehydrogenase | PAM7971_03542 | Not Available | Negative | 3573416 - 3574885 | 52228.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
