Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase large subunit ilvb1 | PAM7971_03413 | Not Available | Negative | 3452416 - 3454149 | 62218.5 |
| pca regulon regulatory protein | PAM7971_03414 | Not Available | Positive | 3454257 - 3454991 | 26608.5 |
| cupin domain protein | PAM7971_03415 | Not Available | Positive | 3455024 - 3455566 | 20794.4 |
| levodione reductase | PAM7971_03416 | Not Available | Negative | 3455569 - 3456336 | 26470.0 |
| vanillin dehydrogenase | PAM7971_03417 | Not Available | Negative | 3456347 - 3457798 | 50802.1 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PAM7971_03418 | Not Available | Negative | 3457811 - 3458521 | 25192.8 |
| lipopolysaccharide export system atp-binding protein lptb | PAM7971_03419 | Not Available | Negative | 3458514 - 3459242 | 26109.1 |
| leucine/isoleucine/valine transporter permease subunit | PAM7971_03420 | Not Available | Negative | 3459239 - 3460159 | 33382.1 |
| high-affinity branched-chain amino acid transport system permease protein livh | PAM7971_03421 | Not Available | Negative | 3460156 - 3461019 | 29716.8 |
| receptor family ligand binding region | PAM7971_03422 | Not Available | Negative | 3461102 - 3462340 | 44325.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
