Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridylate kinase | PAM7971_03383 | Not Available | Positive | 3422924 - 3423658 | 26555.0 |
| ribosome-recycling factor | PAM7971_03384 | Not Available | Positive | 3423740 - 3424303 | 20915.1 |
| ditrans,polycis-undecaprenyl-diphosphate synthase ((2e,6e)-farnesyl-diphosphate specific) | PAM7971_03385 | Not Available | Positive | 3424427 - 3425143 | 27081.4 |
| phosphatidate cytidylyltransferase | PAM7971_03386 | Not Available | Positive | 3425140 - 3425844 | 25114.7 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | PAM7971_03387 | Not Available | Positive | 3425853 - 3427019 | 41331.8 |
| regulator of sigma-e protease rsep | PAM7971_03388 | Not Available | Positive | 3427070 - 3428392 | 47342.8 |
| hypothetical protein | PAM7971_03389 | Not Available | Positive | 3428616 - 3428747 | 4609.76 |
| outer membrane protein assembly factor bama precursor | PAM7971_03390 | Not Available | Positive | 3428981 - 3431323 | 85754.2 |
| outer membrane protein (omph-like) | PAM7971_03391 | Not Available | Positive | 3431419 - 3432006 | 21201.7 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | PAM7971_03392 | Not Available | Positive | 3432225 - 3432683 | 16807.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
