Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium and cobalt efflux protein corc | PAM7971_03373 | Not Available | Negative | 3413346 - 3414653 | 47500.4 |
| tyrosine recombinase xerd | PAM7971_03374 | Not Available | Negative | 3414798 - 3415730 | 34394.2 |
| hypothetical protein | PAM7971_03375 | Not Available | Negative | 3415727 - 3417370 | 58417.9 |
| hypothetical protein | PAM7971_03376 | Not Available | Negative | 3417381 - 3417518 | 4915.27 |
| shikimate kinase | PAM7971_03377 | Not Available | Positive | 3417694 - 3418242 | 19896.2 |
| 3-dehydroquinate synthase | PAM7971_03378 | Not Available | Positive | 3418239 - 3419390 | 40913.5 |
| single-stranded dna-binding protein | PAM7971_03379 | Not Available | Negative | 3419484 - 3420005 | 18173.0 |
| soluble lytic murein transglycosylase precursor | PAM7971_03380 | Not Available | Positive | 3420167 - 3420769 | 21726.3 |
| arabinose operon regulatory protein | PAM7971_03381 | Not Available | Negative | 3420841 - 3421734 | 32890.4 |
| trna dimethylallyltransferase | PAM7971_03382 | Not Available | Negative | 3421861 - 3422910 | 38352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
