Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase 2 | PAM7971_03363 | Not Available | Positive | 3403420 - 3403899 | 17285.6 |
| hypothetical protein | PAM7971_03364 | Not Available | Negative | 3403786 - 3404070 | 10839.4 |
| peptidase m15 | PAM7971_03365 | Not Available | Negative | 3404012 - 3404581 | 20688.7 |
| murein l,d-transpeptidase | PAM7971_03366 | Not Available | Positive | 3405147 - 3406796 | 60759.2 |
| udp-3-o-acylglucosamine n-acyltransferase | PAM7971_03367 | Not Available | Positive | 3406972 - 3408042 | 36116.7 |
| acyl carrier protein | PAM7971_03368 | Not Available | Positive | 3408142 - 3408408 | 9540.15 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | PAM7971_03369 | Not Available | Positive | 3408405 - 3409616 | 42770.2 |
| invasion associated locus b (ialb) protein | PAM7971_03370 | Not Available | Negative | 3409706 - 3410401 | 24168.4 |
| aaa-like domain protein | PAM7971_03371 | Not Available | Positive | 3410912 - 3412495 | 57237.3 |
| ribosomal rna large subunit methyltransferase j | PAM7971_03372 | Not Available | Negative | 3412555 - 3413346 | 29202.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
