Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | PAM7971_03312 | Not Available | Positive | 3356638 - 3357396 | 27484.9 |
| hypothetical protein | PAM7971_03313 | Not Available | Positive | 3357533 - 3357697 | 6091.48 |
| methyl viologen resistance protein yddg | PAM7971_03314 | Not Available | Negative | 3357704 - 3358594 | 30990.4 |
| acetoacetyl-coa reductase | PAM7971_03315 | Not Available | Negative | 3358657 - 3359379 | 25221.2 |
| acetyl-coa acetyltransferase | PAM7971_03316 | Not Available | Negative | 3359459 - 3360634 | 40829.7 |
| cyclic di-gmp phosphodiesterase yfgf | PAM7971_03317 | Not Available | Negative | 3360784 - 3361611 | 30899.3 |
| aerotaxis receptor | PAM7971_03318 | Not Available | Positive | 3361937 - 3363211 | 47179.7 |
| thiol:disulfide interchange protein tlpa | PAM7971_03319 | Not Available | Negative | 3363179 - 3363769 | 21655.3 |
| argininosuccinate lyase 1 | PAM7971_03320 | Not Available | Positive | 3363782 - 3365173 | 50209.9 |
| hypothetical protein | PAM7971_03321 | Not Available | Positive | 3365170 - 3365337 | 5364.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
