Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system permease protein potb | PAM7971_00293 | Not Available | Positive | 289226 - 290080 | 31944.1 |
| inner membrane abc transporter permease protein ydcv | PAM7971_00294 | Not Available | Positive | 290082 - 290918 | 30679.8 |
| asp/glu/hydantoin racemase | PAM7971_00295 | Not Available | Positive | 290918 - 291568 | 21700.2 |
| heme oxygenase | PAM7971_00296 | Not Available | Negative | 291617 - 292213 | 21978.2 |
| heme/hemopexin utilization protein c precursor | PAM7971_00297 | Not Available | Negative | 292288 - 294888 | 93090.1 |
| fec operon regulator fecr | PAM7971_00298 | Not Available | Negative | 295028 - 295981 | 35354.8 |
| ecf rna polymerase sigma factor sige | PAM7971_00299 | Not Available | Negative | 296070 - 296621 | 20722.9 |
| hypothetical protein | PAM7971_00300 | Not Available | Negative | 296698 - 296796 | 3564.51 |
| enamine/imine deaminase | PAM7971_00301 | Not Available | Negative | 297003 - 297398 | 13912.5 |
| hypothetical protein | PAM7971_00302 | Not Available | Negative | 297546 - 297659 | 4119.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
