Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cynr | PAM7971_03242 | Not Available | Negative | 3283182 - 3284093 | 33717.3 |
| tripartite tricarboxylate transporter family receptor | PAM7971_03243 | Not Available | Positive | 3284216 - 3285193 | 33481.1 |
| tripartite tricarboxylate transporter tctb family protein | PAM7971_03244 | Not Available | Positive | 3285257 - 3285766 | 18023.0 |
| tripartite tricarboxylate transporter tcta family protein | PAM7971_03245 | Not Available | Positive | 3285779 - 3287260 | 51604.9 |
| acetylornithine deacetylase | PAM7971_03246 | Not Available | Positive | 3287265 - 3288461 | 42425.4 |
| hth-type transcriptional repressor csir | PAM7971_03247 | Not Available | Negative | 3288493 - 3289194 | 26562.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PAM7971_03248 | Not Available | Negative | 3289349 - 3290305 | 33175.1 |
| hypothetical protein | PAM7971_03249 | Not Available | Negative | 3290367 - 3291968 | 58511.3 |
| ribulokinase | PAM7971_03250 | Not Available | Negative | 3291969 - 3293627 | 58380.1 |
| sialic acid-binding periplasmic protein siap precursor | PAM7971_03251 | Not Available | Positive | 3293858 - 3294853 | 35664.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
