Pacificibacter marinus

ovoidaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pacificibacter

Description

Pacificibacter marinus is a Gram-negative, ovoid bacterium that thrives in aerobic environments, with an optimal growth temperature of 29.0°C. This microbe is characterized by its distinct morphological shape, which contributes to its classification within the broader bacterial community. As a Gram-negative organism, Pacificibacter marinus possesses a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with other microorganisms and its response to environmental stresses. The preference for aerobic conditions suggests that this bacterium relies on oxygen for energy production, potentially positioning it within marine ecosystems where oxygen is readily available. The optimal growth temperature of 29.0°C indicates that Pacificibacter marinus is well-adapted to moderately warm aquatic environments, which may include coastal or open ocean habitats. This temperature preference highlights its potential role in biogeochemical processes that occur in marine ecosystems, particularly those linked to organic matter decomposition and nutrient cycling. Given its specific growth requirements and morphological characteristics, Pacificibacter marinus may serve as an important indicator species for assessing the health of marine environments, particularly in relation to temperature and oxygen levels. Its presence could provide insights into the dynamics of microbial communities in response to changing marine conditions, such as climate change or pollution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPacificibacter
SpeciesPacificibacter marinus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificibacter marinus strain CECT 7971 genome assembly, contig:

Gene Summary

Adenine Count

929310 bp

Thymine Count

947708 bp

Guanine Count

1028045 bp

Cytosine Count

1009585 bp

Genome Length

3914648 bp

Protein-coding Genes

3789 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamyl-trna(gln) amidotransferase subunit aPAM7971_03192Not AvailablePositive3231272 - 323260046021.3
ll-diaminopimelate aminotransferasePAM7971_03193Not AvailablePositive3232697 - 323391143995.7
dna translocase ftskPAM7971_03194Not AvailablePositive3233924 - 3236857105730.0
lipoprotein chaperonePAM7971_03195Not AvailablePositive3236895 - 323754823506.9
hypothetical proteinPAM7971_03196Not AvailableNegative3237552 - 323813622104.6
membrane transport proteinPAM7971_03197Not AvailableNegative3238224 - 323910531296.7
heat shock protein hspqPAM7971_03198Not AvailablePositive3239191 - 323951712620.7
serine/threonine-protein kinase btrwPAM7971_03199Not AvailableNegative3239545 - 324003617925.5
anti-sigma-b factor antagonistPAM7971_03200Not AvailableNegative3240026 - 324037012504.0
ribosomal large subunit pseudouridine synthase aPAM7971_03201Not AvailablePositive3240489 - 324119926695.4

Displaying genes 3191 – 3200 of 3859 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.