Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose import atp-binding protein rbsa | PAM7971_00283 | Not Available | Positive | 278925 - 279674 | 26952.7 |
| xylose isomerase | PAM7971_00284 | Not Available | Positive | 279898 - 281199 | 48422.0 |
| kynureninase | PAM7971_00285 | Not Available | Negative | 281409 - 282560 | 41714.1 |
| putative glutamine abc transporter permease protein glnm | PAM7971_00286 | Not Available | Negative | 282591 - 283262 | 24345.9 |
| cystine-binding periplasmic protein precursor | PAM7971_00287 | Not Available | Negative | 283350 - 284159 | 28907.2 |
| putative hth-type transcriptional regulator ydfh | PAM7971_00288 | Not Available | Positive | 284334 - 285020 | 25881.2 |
| hypothetical protein | PAM7971_00289 | Not Available | Negative | 285039 - 285914 | 31311.3 |
| putative hth-type transcriptional regulator ydfh | PAM7971_00290 | Not Available | Negative | 285911 - 286597 | 25359.2 |
| spermidine/putrescine import atp-binding protein pota | PAM7971_00291 | Not Available | Positive | 286851 - 287825 | 35407.8 |
| spermidine/putrescine abc transporter periplasmic substrate-binding protein | PAM7971_00292 | Not Available | Positive | 287871 - 289133 | 46054.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
