Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c1 precursor | PAM7971_03142 | Not Available | Negative | 3185709 - 3186500 | 28695.1 |
| cytochrome b | PAM7971_03143 | Not Available | Negative | 3186518 - 3187843 | 49637.2 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PAM7971_03144 | Not Available | Negative | 3187855 - 3188418 | 19946.3 |
| hypothetical protein | PAM7971_03145 | Not Available | Positive | 3188669 - 3189334 | 24126.9 |
| hypothetical protein | PAM7971_03146 | Not Available | Negative | 3189345 - 3190013 | 25546.8 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | PAM7971_03147 | Not Available | Negative | 3190010 - 3191272 | 46144.4 |
| diaminopimelate epimerase | PAM7971_03148 | Not Available | Negative | 3191272 - 3192120 | 30634.3 |
| Trna-lys | Not Available | Not Available | Positive | 3192224 - 3192299 | Not Available |
| dihydroxy-acid dehydratase | PAM7971_03150 | Not Available | Negative | 3192491 - 3194332 | 65471.5 |
| hth-type transcriptional regulator gntr | PAM7971_03151 | Not Available | Negative | 3194497 - 3195546 | 37565.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
