Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| farnesyl diphosphate synthase | PAM7971_03131 | Not Available | Positive | 3174472 - 3175338 | 30681.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | PAM7971_03132 | Not Available | Positive | 3175353 - 3177281 | 68079.5 |
| nad dependent epimerase/dehydratase family protein | PAM7971_03133 | Not Available | Negative | 3177282 - 3178145 | 31477.6 |
| amp nucleosidase | PAM7971_03134 | Not Available | Positive | 3178283 - 3179761 | 54703.7 |
| dna-binding protein hu | PAM7971_03135 | Not Available | Positive | 3179892 - 3180179 | 10025.3 |
| putative dmt superfamily transporter inner membrane protein | PAM7971_03136 | Not Available | Positive | 3180260 - 3181120 | 30357.6 |
| chorismate synthase | PAM7971_03137 | Not Available | Negative | 3181122 - 3182225 | 39277.0 |
| thiamine-binding periplasmic protein precursor | PAM7971_03139 | Not Available | Positive | 3182472 - 3183446 | 36023.2 |
| sulfate transport system permease protein cysw | PAM7971_03140 | Not Available | Positive | 3183422 - 3184972 | 55119.1 |
| thiamine import atp-binding protein thiq | PAM7971_03141 | Not Available | Positive | 3184959 - 3185654 | 25136.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
