Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | PAM7971_03121 | Not Available | Positive | 3162500 - 3163933 | 51670.1 |
| glutamate synthase | PAM7971_03122 | Not Available | Positive | 3164109 - 3168644 | 163892.0 |
| penicillin-binding protein 2d | PAM7971_03123 | Not Available | Positive | 3168766 - 3169536 | 28135.1 |
| hypothetical protein | PAM7971_03124 | Not Available | Positive | 3169588 - 3170253 | 25781.8 |
| epoxyqueuosine reductase | PAM7971_03125 | Not Available | Positive | 3170282 - 3171313 | 38066.2 |
| hypothetical protein | PAM7971_03126 | Not Available | Negative | 3171329 - 3171823 | 18001.9 |
| branched-chain-amino-acid aminotransferase | PAM7971_03127 | Not Available | Negative | 3171890 - 3172759 | 31912.2 |
| marr family protein | PAM7971_03128 | Not Available | Positive | 3172928 - 3173434 | 18893.7 |
| transcriptional regulatory protein ompr | PAM7971_03129 | Not Available | Positive | 3173431 - 3174126 | 26204.8 |
| exodeoxyribonuclease 7 small subunit | PAM7971_03130 | Not Available | Positive | 3174230 - 3174472 | 8545.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
