Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-protein kinase etk | PAM7971_03091 | Not Available | Positive | 3145024 - 3147138 | 77192.1 |
| toxin ccdb | PAM7971_03092 | Not Available | Negative | 3147241 - 3147540 | 10623.0 |
| post-segregation antitoxin ccda | PAM7971_03093 | Not Available | Negative | 3147540 - 3147776 | 8536.16 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PAM7971_03094 | Not Available | Positive | 3147996 - 3148559 | 20816.6 |
| dtdp-glucose 4,6-dehydratase 2 | PAM7971_03095 | Not Available | Positive | 3148556 - 3149605 | 38577.4 |
| dtdp-4-dehydrorhamnose reductase | PAM7971_03096 | Not Available | Positive | 3149602 - 3150453 | 30223.8 |
| hypothetical protein | PAM7971_03097 | Not Available | Negative | 3150596 - 3150967 | 13483.3 |
| modification methylase dpniib | PAM7971_03098 | Not Available | Negative | 3150964 - 3151668 | 26042.2 |
| hypothetical protein | PAM7971_03099 | Not Available | Negative | 3151665 - 3151940 | 9273.27 |
| hypothetical protein | PAM7971_03100 | Not Available | Negative | 3151937 - 3152191 | 9179.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
