Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter family receptor | PAM7971_00273 | Not Available | Positive | 266015 - 267013 | 34669.6 |
| tripartite tricarboxylate transporter tctb family protein | PAM7971_00274 | Not Available | Positive | 267141 - 267716 | 20493.6 |
| tripartite tricarboxylate transporter tcta family protein | PAM7971_00275 | Not Available | Positive | 267716 - 269221 | 53696.6 |
| quinate/shikimate dehydrogenase | PAM7971_00276 | Not Available | Positive | 269221 - 270072 | 29921.8 |
| 4-hydroxyphenylpyruvate dioxygenase | PAM7971_00277 | Not Available | Positive | 270069 - 271955 | 69125.3 |
| cytochrome c551 peroxidase precursor | PAM7971_00278 | Not Available | Positive | 272140 - 273498 | 48205.5 |
| aspic and unbv | PAM7971_00279 | Not Available | Negative | 273495 - 274979 | 53348.6 |
| n-acetylglucosamine repressor | PAM7971_00280 | Not Available | Negative | 274976 - 276253 | 46315.5 |
| d-xylose-binding periplasmic protein precursor | PAM7971_00281 | Not Available | Positive | 276450 - 277472 | 35009.9 |
| xylose transport system permease protein xylh | PAM7971_00282 | Not Available | Positive | 277633 - 278928 | 45292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
