Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like superfamily protein | PAM7971_03071 | Not Available | Positive | 3122569 - 3123366 | 28646.7 |
| proteasome subunit beta | PAM7971_03072 | Not Available | Positive | 3123415 - 3124149 | 26990.6 |
| 5-deoxy-glucuronate isomerase | PAM7971_03073 | Not Available | Negative | 3124219 - 3125025 | 30004.2 |
| inosose dehydratase | PAM7971_03074 | Not Available | Negative | 3125035 - 3125931 | 32566.6 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | PAM7971_03075 | Not Available | Negative | 3125940 - 3127781 | 65402.9 |
| 5-dehydro-2-deoxygluconokinase | PAM7971_03076 | Not Available | Negative | 3127796 - 3129727 | 70243.6 |
| ribose import atp-binding protein rbsa | PAM7971_03077 | Not Available | Negative | 3129831 - 3130619 | 28232.5 |
| inner membrane abc transporter permease protein yjff | PAM7971_03078 | Not Available | Negative | 3130622 - 3131755 | 40385.5 |
| d-ribose-binding periplasmic protein precursor | PAM7971_03079 | Not Available | Negative | 3131825 - 3132736 | 31443.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_03080 | Not Available | Negative | 3132789 - 3133583 | 27959.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
