Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative indolepyruvate oxidoreductase subunit b | PAM7971_03061 | Not Available | Positive | 3110770 - 3112320 | 56501.9 |
| all-trans-zeta-carotene desaturase | PAM7971_03062 | Not Available | Positive | 3112325 - 3113872 | 54938.4 |
| periplasmic dipeptide transport protein precursor | PAM7971_03063 | Not Available | Positive | 3113999 - 3115537 | 56285.5 |
| dipeptide transport system permease protein dppb | PAM7971_03064 | Not Available | Positive | 3115607 - 3116614 | 36195.3 |
| glutathione transport system permease protein gsid | PAM7971_03065 | Not Available | Positive | 3116607 - 3117470 | 31312.0 |
| oligopeptide transport atp-binding protein oppd | PAM7971_03066 | Not Available | Positive | 3117467 - 3118366 | 32434.7 |
| oligopeptide transport atp-binding protein oppf | PAM7971_03067 | Not Available | Positive | 3118363 - 3119214 | 30881.3 |
| transglutaminase-like superfamily protein | PAM7971_03068 | Not Available | Positive | 3119300 - 3120124 | 30160.1 |
| hypothetical protein | PAM7971_03069 | Not Available | Positive | 3120182 - 3121609 | 52858.3 |
| hypothetical protein | PAM7971_03070 | Not Available | Positive | 3121615 - 3122556 | 35313.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
