Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine/imine deaminase | PAM7971_03051 | Not Available | Positive | 3101893 - 3102306 | 15257.4 |
| putative acyl-coa thioester hydrolase | PAM7971_03052 | Not Available | Positive | 3102299 - 3102691 | 13866.5 |
| hth-type transcriptional regulator mhqr | PAM7971_03053 | Not Available | Positive | 3102768 - 3103232 | 17451.1 |
| 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | PAM7971_03054 | Not Available | Negative | 3103273 - 3104082 | 28470.2 |
| ureidoglycolate lyase | PAM7971_03055 | Not Available | Negative | 3104079 - 3104921 | 30113.9 |
| cupin domain protein | PAM7971_03056 | Not Available | Negative | 3105003 - 3105428 | 15838.4 |
| kynurenine formamidase | PAM7971_03057 | Not Available | Positive | 3105785 - 3106579 | 28645.6 |
| dehydrosqualene desaturase | PAM7971_03058 | Not Available | Positive | 3106593 - 3108158 | 54901.1 |
| transcriptional regulator slya | PAM7971_03059 | Not Available | Positive | 3108155 - 3108601 | 16721.9 |
| indolepyruvate ferredoxin oxidoreductase | PAM7971_03060 | Not Available | Positive | 3108613 - 3110757 | 76967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
