Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabonate dehydratase | PAM7971_03041 | Not Available | Positive | 3089662 - 3091395 | 62577.4 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | PAM7971_03042 | Not Available | Positive | 3091405 - 3092130 | 26098.2 |
| hypothetical protein | PAM7971_03043 | Not Available | Positive | 3092266 - 3092373 | 3717.5 |
| acetoin catabolism regulatory protein | PAM7971_03044 | Not Available | Positive | 3092656 - 3094377 | 62332.9 |
| putative oxidoreductase czco | PAM7971_03045 | Not Available | Positive | 3094519 - 3096318 | 66900.0 |
| sorbitol dehydrogenase | PAM7971_03046 | Not Available | Positive | 3096382 - 3097434 | 37303.1 |
| acyl-coa thioesterase ybgc | PAM7971_03047 | Not Available | Negative | 3097672 - 3098088 | 15661.9 |
| nadph dehydrogenase | PAM7971_03048 | Not Available | Positive | 3098427 - 3100712 | 85102.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_03049 | Not Available | Positive | 3100709 - 3101452 | 25403.8 |
| 4-hydroxybenzoyl-coa thioesterase | PAM7971_03050 | Not Available | Positive | 3101449 - 3101877 | 15983.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
