Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thermoresistant gluconokinase | PAM7971_03031 | Not Available | Positive | 3082936 - 3083436 | 17904.5 |
| hypothetical protein | PAM7971_03032 | Not Available | Positive | 3083433 - 3083531 | 3585.6 |
| hypothetical protein | PAM7971_03033 | Not Available | Positive | 3083604 - 3083927 | 11804.1 |
| hth-type transcriptional regulator gntr | PAM7971_03034 | Not Available | Positive | 3084113 - 3085117 | 36168.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PAM7971_03035 | Not Available | Positive | 3085229 - 3085531 | 10685.5 |
| putative hth-type transcriptional regulator ydfh | PAM7971_03036 | Not Available | Negative | 3085698 - 3086423 | 27243.5 |
| lactate-binding periplasmic protein precursor | PAM7971_03037 | Not Available | Positive | 3086557 - 3087582 | 36789.2 |
| tripartite atp-independent periplasmic transporters, dctq component | PAM7971_03038 | Not Available | Positive | 3087651 - 3088172 | 19596.4 |
| sialic acid trap transporter permease protein siat | PAM7971_03039 | Not Available | Positive | 3088162 - 3089478 | 46881.3 |
| hypothetical protein | PAM7971_03040 | Not Available | Positive | 3089487 - 3089657 | 6091.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
