Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kipi antagonist | PAM7971_03011 | Not Available | Positive | 3061774 - 3062751 | 34677.5 |
| hypothetical protein | PAM7971_03012 | Not Available | Positive | 3062753 - 3063157 | 14145.0 |
| lamb/ycsf family protein | PAM7971_03013 | Not Available | Positive | 3063154 - 3063930 | 27213.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | PAM7971_03014 | Not Available | Positive | 3063958 - 3064731 | 27781.5 |
| aspartate aminotransferase | PAM7971_03015 | Not Available | Positive | 3064824 - 3066032 | 42723.1 |
| periplasmic dipeptide transport protein precursor | PAM7971_03016 | Not Available | Positive | 3066332 - 3067960 | 58866.9 |
| nickel transport system permease protein nikb | PAM7971_03017 | Not Available | Positive | 3068011 - 3068979 | 35286.8 |
| glutathione transport system permease protein gsid | PAM7971_03018 | Not Available | Positive | 3068972 - 3069847 | 32053.0 |
| oligopeptide transport atp-binding protein oppd | PAM7971_03019 | Not Available | Positive | 3069849 - 3070841 | 35961.6 |
| oligopeptide transport atp-binding protein oppf | PAM7971_03020 | Not Available | Positive | 3070838 - 3071815 | 35965.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
