Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_02991 | Not Available | Positive | 3041065 - 3041892 | 29326.4 |
| hypothetical protein | PAM7971_02992 | Not Available | Negative | 3041986 - 3043731 | 62861.5 |
| 1,5-anhydro-d-fructose reductase | PAM7971_02993 | Not Available | Negative | 3043731 - 3044753 | 37040.3 |
| ribose transport system permease protein rbsc | PAM7971_02994 | Not Available | Negative | 3044757 - 3045818 | 36528.6 |
| ribose import atp-binding protein rbsa | PAM7971_02995 | Not Available | Negative | 3045818 - 3047356 | 55766.8 |
| hypothetical protein | PAM7971_02996 | Not Available | Negative | 3047356 - 3048012 | 23326.5 |
| d-ribose-binding periplasmic protein precursor | PAM7971_02997 | Not Available | Negative | 3048081 - 3049028 | 33388.4 |
| hth-type transcriptional regulator lutr | PAM7971_02998 | Not Available | Negative | 3049352 - 3050161 | 30051.1 |
| ribulose bisphosphate carboxylase-like protein 2 | PAM7971_02999 | Not Available | Positive | 3050288 - 3051538 | 44653.6 |
| putative sugar phosphate isomerase ywlf | PAM7971_03000 | Not Available | Negative | 3051607 - 3052056 | 15111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
