Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator eutr | PAM7971_00263 | Not Available | Positive | 255066 - 256091 | 37364.7 |
| transcriptional activator ftra | PAM7971_00264 | Not Available | Positive | 256209 - 257168 | 36202.4 |
| tryptophan synthase alpha chain | PAM7971_00265 | Not Available | Positive | 257319 - 258095 | 27446.1 |
| xylulose kinase | PAM7971_00266 | Not Available | Positive | 258088 - 259575 | 53364.8 |
| d-ribose-binding periplasmic protein precursor | PAM7971_00267 | Not Available | Positive | 259600 - 260517 | 32355.3 |
| ribose import atp-binding protein rbsa | PAM7971_00268 | Not Available | Positive | 260514 - 262070 | 55526.3 |
| ribose transport system permease protein rbsc | PAM7971_00269 | Not Available | Positive | 262067 - 262999 | 31738.8 |
| tryptophan synthase beta chain | PAM7971_00270 | Not Available | Positive | 263002 - 264195 | 41539.6 |
| tryptophan synthase alpha chain | PAM7971_00271 | Not Available | Positive | 264192 - 265058 | 30378.6 |
| hth-type transcriptional repressor nics | PAM7971_00272 | Not Available | Negative | 265160 - 265855 | 25956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
